Imports
abind, basilisk, bambu, BiocParallel, Biostrings,
BiocGenerics, crew, circlize, ComplexHeatmap, cowplot, cli,
dplyr, GenomicRanges, GenomicFeatures, GenomicAlignments,
Seqinfo, ggplot2, grid, gridExtra, igraph, jsonlite, magrittr,
magick, Matrix, MatrixGenerics, readr, reticulate, Rsamtools,
rtracklayer, RColorBrewer, R.utils, S4Arrays, ShortRead,
SingleCellExperiment, SummarizedExperiment, SpatialExperiment,
scater, scatterpie, scrapper (>= 1.5.17), S4Vectors, scuttle,
stats, scran, stringr, tidyr, utils, withr, methods, tibble,
tidyselect, IRanges
Suggests
BiocStyle, GEOquery, ggrastr, knitr, rmarkdown, uwot,
testthat (>= 3.0.0), xml2