Imports
ompBAM, methods, stats, utils, tools, parallel, scales,
magrittr, Rcpp (>= 1.0.5), data.table, fst, ggplot2,
AnnotationHub, RSQLite, BiocFileCache, BiocGenerics,
BiocParallel, Biostrings, BSgenome, DelayedArray,
DelayedMatrixStats, genefilter, GenomeInfoDb, GenomicRanges,
HDF5Array, h5mread, htmltools, IRanges, patchwork, pheatmap,
progress, plotly, R.utils, rhdf5, rtracklayer,
SummarizedExperiment, S4Vectors, shiny, shinyFiles,
shinyWidgets, shinydashboard, stringi, rhandsontable, DT,
grDevices, heatmaply, matrixStats, RColorBrewer, rvest, httr
Suggests
knitr, rmarkdown, crayon, splines, testthat (>= 3.0.0),
DESeq2, limma, DoubleExpSeq, edgeR, DBI, GO.db, AnnotationDbi,
fgsea, Rsubread