secsse

R 패키지 메타데이터와 수집 신호를 모아 봅니다.

Packages / CRAN / secsse

secsse

v3.7.0

secsse

Repository CRANLicense GPL (>= 3) | file LICENSELifecycle activeNeeds compilation yes

Package page Reference Source DOI NEWS

DOI

10.32614/CRAN.package.secsse

Task views

Phylogenetics

Core Signals

첫 화면에서 판단해야 할 수집 신호를 먼저 배치합니다.

Task views

Phylogenetics

Supported Backends

DESCRIPTION에서 감지한 backend 관련 package입니다.

backend package 신호가 없습니다.

Quick Facts

기본 메타데이터를 작은 카드와 토큰으로 압축합니다.

profile

Repository

CRAN

Version

3.7.0

License

GPL (>= 3) | file LICENSE

Lifecycle

active

Needs compilation

yes

Last observed

2026-05-30

CRAN: cran.r-project.org/package=secsse

Build fields

LinkingTo

RcppRcppParallelBH (>= 1.81.0-1)

수집 소스별 패키지 정보

1개 소스

CRAN

3.7.0

2026-05-30

License

GPL (>= 3) | file LICENSE

Depends

R (>= 4.2.0)

Imports

utils, DDD (>= 5.2.4), ape, geiger, Rcpp (>= 1.0.10), RcppParallel, ggplot2, tibble, rlang, treestats, pracma

Suggests

diversitree, phytools, testthat, subplex, knitr, rmarkdown

LinkingTo

Rcpp, RcppParallel, BH (>= 1.81.0-1)

Needs compilation

yes

Lifecycle

active

Last observed

2026-05-30 10:45:11

이 패키지가 의존하는 패키지

5개 표시전체 20개

Package	Type	Spec
ape CRAN · 3.7.0 · 2026-05-30	Imports	ape
DDD CRAN · 3.7.0 · 2026-05-30	Imports	DDD (>= 5.2.4)
geiger CRAN · 3.7.0 · 2026-05-30	Imports	geiger
ggplot2 CRAN · 3.7.0 · 2026-05-30	Imports	ggplot2
pracma CRAN · 3.7.0 · 2026-05-30	Imports	pracma
Rcpp CRAN · 3.7.0 · 2026-05-30	Imports	Rcpp (>= 1.0.10)
RcppParallel CRAN · 3.7.0 · 2026-05-30	Imports	RcppParallel
rlang CRAN · 3.7.0 · 2026-05-30	Imports	rlang
tibble CRAN · 3.7.0 · 2026-05-30	Imports	tibble
treestats CRAN · 3.7.0 · 2026-05-30	Imports	treestats
utils CRAN · 3.7.0 · 2026-05-30	Imports	utils
BH CRAN · 3.7.0 · 2026-05-30	LinkingTo	BH (>= 1.81.0-1)
Rcpp CRAN · 3.7.0 · 2026-05-30	LinkingTo	Rcpp
RcppParallel CRAN · 3.7.0 · 2026-05-30	LinkingTo	RcppParallel
diversitree CRAN · 3.7.0 · 2026-05-30	Suggests	diversitree
knitr CRAN · 3.7.0 · 2026-05-30	Suggests	knitr
phytools CRAN · 3.7.0 · 2026-05-30	Suggests	phytools
rmarkdown CRAN · 3.7.0 · 2026-05-30	Suggests	rmarkdown
subplex CRAN · 3.7.0 · 2026-05-30	Suggests	subplex
testthat CRAN · 3.7.0 · 2026-05-30	Suggests	testthat
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패키지 페이지

All links

Repository: CRAN
Version: 3.7.0
Collected: 2026-05-17 19:10:32
Package page: https://cran.r-project.org/web/packages/secsse/index.html
DOI: 10.32614/CRAN.package.secsse
Citation: https://cran.r-project.org/web/packages/secsse/citation.html
CRAN checks: https://cran.r-project.org/web/checks/check_results_secsse.html
NEWS: https://cran.r-project.org/web/packages/secsse/news/news.html
Reference HTML: https://cran.r-project.org/web/packages/secsse/refman/secsse.html
Reference PDF: https://cran.r-project.org/web/packages/secsse/secsse.pdf
Source package: https://cran.r-project.org/src/contrib/secsse_3.7.0.tar.gz
Archive: https://CRAN.R-project.org/src/contrib/Archive/secsse

In views

Phylogenetics

Page fields

Author: Leonel Herrera Alsina [aut], Paul van Els [aut], Thijs Janzen [ctb], Hanno Hildenbrandt [ctb], Pedro Santos Neves [ctb], Rampal S. Etienne [cre, aut]
BugReports: https://github.com/rsetienne/secsse/issues
CRAN Checks: secsse results
Citation: secsse citation info
Copyright: see file COPYRIGHTS
DOI: 10.32614/CRAN.package.secsse
In Views: Phylogenetics
License: GPL (≥ 3) | file LICENSE
LinkingTo: Rcpp , RcppParallel , BH (≥ 1.81.0-1)
Maintainer: Rampal S. Etienne <r.s.etienne at rug.nl>
Materials: NEWS
NeedsCompilation: yes
Old Sources: secsse archive
Package Source: secsse_3.7.0.tar.gz
Published: 2026-05-15
Reference Manual: secsse.html , secsse.pdf
SystemRequirements: C++17
URL: https://rsetienne.github.io/secsse/ , https://github.com/rsetienne/secsse
Version: 3.7.0
Vignettes: Using secsse with complete phylogenies (with extinction) ( source , R code ) Plotting probabilities ( source , R code ) Simulating with secsse ( source , R code ) Starting secsse ( source , R code )
Windows Binaries: r-devel: secsse_3.7.0.zip , r-release: secsse_3.5.0.zip , r-oldrel: secsse_3.7.0.zip
MacOS Binaries: r-release (arm64): secsse_3.7.0.tgz , r-oldrel (arm64): secsse_3.7.0.tgz , r-release (x86_64): secsse_3.7.0.tgz , r-oldrel (x86_64): secsse_3.7.0.tgz

Version

3.7.0

LinkingTo

Rcpp , RcppParallel , BH (≥ 1.81.0-1)

Rcpp RcppParallel BH

Published

2026-05-15

DOI

10.32614/CRAN.package.secsse

Author

Leonel Herrera Alsina [aut], Paul van Els [aut], Thijs Janzen [ctb], Hanno Hildenbrandt [ctb], Pedro Santos Neves [ctb], Rampal S. Etienne [cre, aut]

https://orcid.org/0000-0003-0474-3592 https://orcid.org/0000-0002-9499-8873 https://orcid.org/0000-0002-4162-1140 https://orcid.org/0000-0002-6784-1037 https://orcid.org/0000-0003-2561-4677 https://orcid.org/0000-0003-2142-7612

Maintainer

Rampal S. Etienne <r.s.etienne at rug.nl>

BugReports

https://github.com/rsetienne/secsse/issues

License

GPL (≥ 3) | file LICENSE

GPL (≥ 3)LICENSE

see file COPYRIGHTS

COPYRIGHTS

URL

https://rsetienne.github.io/secsse/ , https://github.com/rsetienne/secsse

https://rsetienne.github.io/secsse/https://github.com/rsetienne/secsse

NeedsCompilation

yes

SystemRequirements

C++17

Citation

secsse citation info

Materials

NEWS

In Views

Phylogenetics

CRAN Checks

secsse results

Reference Manual

secsse.html , secsse.pdf

secsse.html secsse.pdf

Vignettes

Using secsse with complete phylogenies (with extinction) ( source , R code ) Plotting probabilities ( source , R code ) Simulating with secsse ( source , R code ) Starting secsse ( source , R code )

Using secsse with complete phylogenies (with extinction)source R code Plotting probabilities source R code Simulating with secsse source R code Starting secsse source R code

Package Source

secsse_3.7.0.tar.gz

Windows Binaries

r-devel: secsse_3.7.0.zip , r-release: secsse_3.5.0.zip , r-oldrel: secsse_3.7.0.zip

secsse_3.7.0.zip secsse_3.5.0.zip secsse_3.7.0.zip

MacOS Binaries

r-release (arm64): secsse_3.7.0.tgz , r-oldrel (arm64): secsse_3.7.0.tgz , r-release (x86_64): secsse_3.7.0.tgz , r-oldrel (x86_64): secsse_3.7.0.tgz

secsse_3.7.0.tgz secsse_3.7.0.tgz secsse_3.7.0.tgz secsse_3.7.0.tgz

Old Sources

secsse archive

Page sections 3

Documentation

Heading

Documentation

Links

[{"label":"secsse.html","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/refman/secsse.html"},{"label":"secsse.pdf","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/secsse.pdf"},{"label":"Using secsse with complete phylogenies (with extinction)","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/vignettes/complete_tree.html"},{"label":"source","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/vignettes/complete_tree.Rmd"},{"label":"R code","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/vignettes/complete_tree.R"},{"label":"Plotting probabilities","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/vignettes/plotting_states.html"},{"label":"source","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/vignettes/plotting_states.Rmd"},{"label":"R code","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/vignettes/plotting_states.R"},{"label":"Simulating with secsse","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/vignettes/sim_with_secsse.html"},{"label":"source","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/vignettes/sim_with_secsse.Rmd"},{"label":"R code","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/vignettes/sim_with_secsse.R"},{"label":"Starting secsse","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/vignettes/starting_secsse.html"},{"label":"source","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/vignettes/starting_secsse.Rmd"},{"label":"R code","section":"","type":"","url":"https://cran.r-project.org/web/packages/secsse/vignettes/starting_secsse.R"}]

Text

Reference manual: secsse.html , secsse.pdf Vignettes: Using secsse with complete phylogenies (with extinction) ( source , R code ) Plotting probabilities ( source , R code ) Simulating with secsse ( source , R code ) Starting secsse ( source , R code )

Downloads

Heading

Downloads

Links

[{"label":"secsse_3.7.0.tar.gz","section":"","type":"","url":"https://cran.r-project.org/src/contrib/secsse_3.7.0.tar.gz"},{"label":"secsse_3.7.0.zip","section":"","type":"","url":"https://cran.r-project.org/bin/windows/contrib/4.7/secsse_3.7.0.zip"},{"label":"secsse_3.5.0.zip","section":"","type":"","url":"https://cran.r-project.org/bin/windows/contrib/4.6/secsse_3.5.0.zip"},{"label":"secsse_3.7.0.zip","section":"","type":"","url":"https://cran.r-project.org/bin/windows/contrib/4.5/secsse_3.7.0.zip"},{"label":"secsse_3.7.0.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/sonoma-arm64/contrib/4.6/secsse_3.7.0.tgz"},{"label":"secsse_3.7.0.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/big-sur-arm64/contrib/4.5/secsse_3.7.0.tgz"},{"label":"secsse_3.7.0.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.6/secsse_3.7.0.tgz"},{"label":"secsse_3.7.0.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.5/secsse_3.7.0.tgz"},{"label":"secsse archive","section":"","type":"","url":"https://CRAN.R-project.org/src/contrib/Archive/secsse"}]

Text

Package source: secsse_3.7.0.tar.gz Windows binaries: r-devel: secsse_3.7.0.zip , r-release: secsse_3.5.0.zip , r-oldrel: secsse_3.7.0.zip macOS binaries: r-release (arm64): secsse_3.7.0.tgz , r-oldrel (arm64): secsse_3.7.0.tgz , r-release (x86_64): secsse_3.7.0.tgz , r-oldrel (x86_64): secsse_3.7.0.tgz Old sources: secsse archive

Linking

Heading

Linking

Links

[{"label":"https://CRAN.R-project.org/package=secsse","section":"","type":"","url":"https://CRAN.R-project.org/package=secsse"}]

Text

Please use the canonical form https://CRAN.R-project.org/package=secsse to link to this page.

Materials 1

NEWS

Documentation 14

secsse.html secsse.pdf Using secsse with complete phylogenies (with extinction)source R code Plotting probabilities source R code Simulating with secsse source R code Starting secsse source R code

Vignettes 12

Using secsse with complete phylogenies (with extinction)source R code Plotting probabilities source R code Simulating with secsse source R code Starting secsse source R code

Downloads 9

secsse_3.7.0.tar.gz secsse_3.7.0.zip secsse_3.5.0.zip secsse_3.7.0.zip secsse_3.7.0.tgz secsse_3.7.0.tgz secsse_3.7.0.tgz secsse_3.7.0.tgz secsse archive

All page links 59

utils DDD ape geiger Rcpp RcppParallel ggplot2 tibble rlang treestats pracma BH diversitree phytools testthat subplex knitr rmarkdown 10.32614/CRAN.package.secsse https://orcid.org/0000-0003-0474-3592 https://orcid.org/0000-0002-9499-8873 https://orcid.org/0000-0002-4162-1140 https://orcid.org/0000-0002-6784-1037 https://orcid.org/0000-0003-2561-4677 https://orcid.org/0000-0003-2142-7612 https://github.com/rsetienne/secsse/issues GPL (≥ 3)LICENSE COPYRIGHTS https://rsetienne.github.io/secsse/https://github.com/rsetienne/secsse secsse citation info NEWS Phylogenetics secsse results secsse.html secsse.pdf Using secsse with complete phylogenies (with extinction)source R code Plotting probabilities source R code Simulating with secsse source R code Starting secsse source R code secsse_3.7.0.tar.gz secsse_3.7.0.zip secsse_3.5.0.zip secsse_3.7.0.zip secsse_3.7.0.tgz secsse_3.7.0.tgz secsse_3.7.0.tgz secsse_3.7.0.tgz secsse archive https://CRAN.R-project.org/package=secsse

버전 이력

Repository	Version	Published	First seen	Last seen	Docs
CRAN	3.7.0		2026-05-29	2026-05-30
CRAN	3.5.0		2026-05-15	2026-05-15

보안

표시할 OSV 데이터가 없습니다.

문헌 신호

표시할 OpenAlex 데이터가 없습니다.

CRAN Task Views

Phylogenetics · 2026-05-30