TCA

R 패키지 메타데이터와 수집 신호를 모아 봅니다.

Packages / CRAN / TCA

TCA

v1.2.1

TCA

Repository CRANLicense GPL-3Lifecycle activeNeeds compilation no

Package page Reference Source DOI README NEWS

DOI

10.32614/CRAN.package.TCA

Task views

Genomics, Proteomics, Metabolomics, Transcriptomics, and Other Omics

Core Signals

첫 화면에서 판단해야 할 수집 신호를 먼저 배치합니다.

Task views

Genomics, Proteomics, Metabolomics, Transcriptomics, and Other Omics

Supported Backends

DESCRIPTION에서 감지한 backend 관련 package입니다.

data.table

Imports

Quick Facts

기본 메타데이터를 작은 카드와 토큰으로 압축합니다.

profile

Repository

CRAN

Version

1.2.1

License

GPL-3

Lifecycle

active

Needs compilation

Last observed

2026-05-30

CRAN: cran.r-project.org/package=TCA

수집 소스별 패키지 정보

1개 소스

CRAN

1.2.1

2026-05-30

License

GPL-3

Depends

R (>= 3.5.0)

Imports

config, data.table, futile.logger, gmodels, matrixcalc, matrixStats, nloptr, parallel, pbapply, pracma, rsvd, stats, quadprog, Matrix

Suggests

testthat, knitr, rmarkdown

Needs compilation

Lifecycle

active

Last observed

2026-05-30 10:45:11

이 패키지가 의존하는 패키지

5개 표시전체 17개

Package	Type	Spec
config CRAN · 1.2.1 · 2026-05-30	Imports	config
data.table CRAN · 1.2.1 · 2026-05-30	Imports	data.table
futile.logger CRAN · 1.2.1 · 2026-05-30	Imports	futile.logger
gmodels CRAN · 1.2.1 · 2026-05-30	Imports	gmodels
Matrix CRAN · 1.2.1 · 2026-05-30	Imports	Matrix
matrixcalc CRAN · 1.2.1 · 2026-05-30	Imports	matrixcalc
matrixStats CRAN · 1.2.1 · 2026-05-30	Imports	matrixStats
nloptr CRAN · 1.2.1 · 2026-05-30	Imports	nloptr
parallel CRAN · 1.2.1 · 2026-05-30	Imports	parallel
pbapply CRAN · 1.2.1 · 2026-05-30	Imports	pbapply
pracma CRAN · 1.2.1 · 2026-05-30	Imports	pracma
quadprog CRAN · 1.2.1 · 2026-05-30	Imports	quadprog
rsvd CRAN · 1.2.1 · 2026-05-30	Imports	rsvd
stats CRAN · 1.2.1 · 2026-05-30	Imports	stats
knitr CRAN · 1.2.1 · 2026-05-30	Suggests	knitr
rmarkdown CRAN · 1.2.1 · 2026-05-30	Suggests	rmarkdown
testthat CRAN · 1.2.1 · 2026-05-30	Suggests	testthat
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패키지 페이지

Reverse imports

All links

Repository: CRAN
Version: 1.2.1
Collected: 2026-05-19 11:35:32
Package page: https://cran.r-project.org/web/packages/TCA/index.html
DOI: 10.32614/CRAN.package.TCA
Citation: https://cran.r-project.org/web/packages/TCA/citation.html
CRAN checks: https://cran.r-project.org/web/checks/check_results_TCA.html
README: https://cran.r-project.org/web/packages/TCA/readme/README.html
NEWS: https://cran.r-project.org/web/packages/TCA/news/news.html
Reference HTML: https://cran.r-project.org/web/packages/TCA/refman/TCA.html
Reference PDF: https://cran.r-project.org/web/packages/TCA/TCA.pdf
Source package: https://cran.r-project.org/src/contrib/TCA_1.2.1.tar.gz
Archive: https://CRAN.R-project.org/src/contrib/Archive/TCA

In views

Omics

Page fields

Author: Elior Rahmani [aut, cre], Brandon Jew [ctb]
BugReports: https://github.com/cozygene/TCA/issues
CRAN Checks: TCA results
Citation: TCA citation info
DOI: 10.32614/CRAN.package.TCA
In Views: Omics
License: GPL-3
Maintainer: Elior Rahmani <elior.rahmani at gmail.com>
Materials: README , NEWS
NeedsCompilation: no
Old Sources: TCA archive
Package Source: TCA_1.2.1.tar.gz
Published: 2021-02-14
Reference Manual: TCA.html , TCA.pdf
Reverse Imports: cypress , MICSQTL
URL: https://www.nature.com/articles/s41467-019-11052-9
Version: 1.2.1
Vignettes: Detecting differential DNA methylation at cell-type resolution using TCA ( source , R code )
Windows Binaries: r-devel: TCA_1.2.1.zip , r-release: TCA_1.2.1.zip , r-oldrel: TCA_1.2.1.zip
MacOS Binaries: r-release (arm64): TCA_1.2.1.tgz , r-oldrel (arm64): TCA_1.2.1.tgz , r-release (x86_64): TCA_1.2.1.tgz , r-oldrel (x86_64): TCA_1.2.1.tgz

Version

1.2.1

Published

2021-02-14

DOI

10.32614/CRAN.package.TCA

Author

Elior Rahmani [aut, cre], Brandon Jew [ctb]

Maintainer

Elior Rahmani <elior.rahmani at gmail.com>

BugReports

https://github.com/cozygene/TCA/issues

License

GPL-3

URL

https://www.nature.com/articles/s41467-019-11052-9

NeedsCompilation

Citation

TCA citation info

Materials

README , NEWS

README NEWS

In Views

Omics

CRAN Checks

TCA results

Reference Manual

TCA.html , TCA.pdf

TCA.html TCA.pdf

Vignettes

Detecting differential DNA methylation at cell-type resolution using TCA ( source , R code )

Detecting differential DNA methylation at cell-type resolution using TCA source R code

Package Source

TCA_1.2.1.tar.gz

Windows Binaries

r-devel: TCA_1.2.1.zip , r-release: TCA_1.2.1.zip , r-oldrel: TCA_1.2.1.zip

TCA_1.2.1.zip TCA_1.2.1.zip TCA_1.2.1.zip

MacOS Binaries

r-release (arm64): TCA_1.2.1.tgz , r-oldrel (arm64): TCA_1.2.1.tgz , r-release (x86_64): TCA_1.2.1.tgz , r-oldrel (x86_64): TCA_1.2.1.tgz

TCA_1.2.1.tgz TCA_1.2.1.tgz TCA_1.2.1.tgz TCA_1.2.1.tgz

Old Sources

TCA archive

Reverse Imports

cypress , MICSQTL

cypress MICSQTL

Page sections 4

Documentation

Heading

Documentation

Links

[{"label":"TCA.html","section":"","type":"","url":"https://cran.r-project.org/web/packages/TCA/refman/TCA.html"},{"label":"TCA.pdf","section":"","type":"","url":"https://cran.r-project.org/web/packages/TCA/TCA.pdf"},{"label":"Detecting differential DNA methylation at cell-type resolution using TCA","section":"","type":"","url":"https://cran.r-project.org/web/packages/TCA/vignettes/tca-vignette.html"},{"label":"source","section":"","type":"","url":"https://cran.r-project.org/web/packages/TCA/vignettes/tca-vignette.Rmd"},{"label":"R code","section":"","type":"","url":"https://cran.r-project.org/web/packages/TCA/vignettes/tca-vignette.R"}]

Text

Reference manual: TCA.html , TCA.pdf Vignettes: Detecting differential DNA methylation at cell-type resolution using TCA ( source , R code )

Downloads

Heading

Downloads

Links

[{"label":"TCA_1.2.1.tar.gz","section":"","type":"","url":"https://cran.r-project.org/src/contrib/TCA_1.2.1.tar.gz"},{"label":"TCA_1.2.1.zip","section":"","type":"","url":"https://cran.r-project.org/bin/windows/contrib/4.7/TCA_1.2.1.zip"},{"label":"TCA_1.2.1.zip","section":"","type":"","url":"https://cran.r-project.org/bin/windows/contrib/4.6/TCA_1.2.1.zip"},{"label":"TCA_1.2.1.zip","section":"","type":"","url":"https://cran.r-project.org/bin/windows/contrib/4.5/TCA_1.2.1.zip"},{"label":"TCA_1.2.1.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/sonoma-arm64/contrib/4.6/TCA_1.2.1.tgz"},{"label":"TCA_1.2.1.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/big-sur-arm64/contrib/4.5/TCA_1.2.1.tgz"},{"label":"TCA_1.2.1.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.6/TCA_1.2.1.tgz"},{"label":"TCA_1.2.1.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.5/TCA_1.2.1.tgz"},{"label":"TCA archive","section":"","type":"","url":"https://CRAN.R-project.org/src/contrib/Archive/TCA"}]

Text

Package source: TCA_1.2.1.tar.gz Windows binaries: r-devel: TCA_1.2.1.zip , r-release: TCA_1.2.1.zip , r-oldrel: TCA_1.2.1.zip macOS binaries: r-release (arm64): TCA_1.2.1.tgz , r-oldrel (arm64): TCA_1.2.1.tgz , r-release (x86_64): TCA_1.2.1.tgz , r-oldrel (x86_64): TCA_1.2.1.tgz Old sources: TCA archive

Reverse dependencies

Heading

Reverse dependencies

Links

[{"label":"cypress","section":"","type":"","url":"https://www.bioconductor.org/packages/release/bioc/html/cypress.html"},{"label":"MICSQTL","section":"","type":"","url":"https://www.bioconductor.org/packages/release/bioc/html/MICSQTL.html"}]

Text

Reverse imports: cypress , MICSQTL

Linking

Heading

Linking

Links

[{"label":"https://CRAN.R-project.org/package=TCA","section":"","type":"","url":"https://CRAN.R-project.org/package=TCA"}]

Text

Please use the canonical form https://CRAN.R-project.org/package=TCA to link to this page.

Materials 2

README NEWS

Documentation 5