TreeDist

R 패키지 메타데이터와 수집 신호를 모아 봅니다.

Packages / CRAN / TreeDist

TreeDist

v2.14.0
Repository CRANLicense GPL (>= 3)Lifecycle activeNeeds compilation yes
Package pageReferenceSourceDOINEWS
DOI
10.32614/CRAN.package.TreeDist
Task views
Optimization and Mathematical Programming, Phylogenetics
Reverse imports
196

Core Signals

첫 화면에서 판단해야 할 수집 신호를 먼저 배치합니다.

2
Task views
Optimization and Mathematical Programming, Phylogenetics
Reverse imports
196

Supported Backends

DESCRIPTION에서 감지한 backend 관련 package입니다.

0
backend package 신호가 없습니다.

Quick Facts

기본 메타데이터를 작은 카드와 토큰으로 압축합니다.

profile
Repository
CRAN
Version
2.14.0
License
GPL (>= 3)
Lifecycle
active
Needs compilation
yes
Reverse imports
196
Last observed
2026-05-30
CRAN
cran.r-project.org/package=TreeDist

Build fields

LinkingTo
2
RcppTreeTools (>= 2.1.0)

수집 소스별 패키지 정보

1개 소스
CRAN
2.14.0
2026-05-30
License
GPL (>= 3)
Depends
R (>= 4.0), stats,
Imports
ape (>= 5.0), cli (>= 3.0), colorspace, Rdpack (>= 0.7), shiny, shinyjs, TreeTools (>= 2.1.0),
Suggests
bookdown, cluster, ggplot2, hypervolume, kdensity, knitr, MASS, parallel, phangorn (>= 2.2.1), plotly, PlotTools, protoclust, Quartet, readxl, rmarkdown, Rcpp (>= 1.0.8), rgl, Rogue, spelling, TBRDist, testthat (>= 3.0), Ternary (>= 1.1.2), TreeDistData (> 0.1.0), TreeSearch (>= 1.4.0), Umatrix, vdiffr (>= 1.0.0), withr,
LinkingTo
Rcpp, TreeTools (>= 2.1.0),
Needs compilation
yes
Reverse imports
196
Lifecycle
active
Last observed
2026-05-30 10:45:11

이 패키지가 의존하는 패키지

5개 표시전체 37개
PackageTypeSpec
stats
CRAN · 2.14.0 · 2026-05-30
Dependsstats
ape
CRAN · 2.14.0 · 2026-05-30
Importsape (>= 5.0)
cli
CRAN · 2.14.0 · 2026-05-30
Importscli (>= 3.0)
colorspace
CRAN · 2.14.0 · 2026-05-30
Importscolorspace
Rdpack
CRAN · 2.14.0 · 2026-05-30
ImportsRdpack (>= 0.7)
1 / 8

이 패키지를 쓰는 패키지

5개 표시전체 6개
PackageTypeSpec
Rogue
2.2.0
CRAN · 2026-05-30
ImportsTreeDist (> 2.2.0)
rwty
1.0.3
CRAN · 2026-05-30
ImportsTreeDist
TBRDist
2.0.0
CRAN · 2026-05-30
ImportsTreeDist
Ternary
2.3.6
CRAN · 2026-05-30
ImportsTreeDist
TreeSearch
1.7.0
CRAN · 2026-05-30
ImportsTreeDist (>= 2.6.3)
1 / 2

Reverse dependency summary

2 types
TypePackages
Imports5
Suggests1

패키지 페이지

Reverse imports
10
Reverse suggests
2
All links
82
Repository
CRAN
Version
2.14.0
Collected
2026-05-20 00:07:36
Package page
https://cran.r-project.org/web/packages/TreeDist/index.html
DOI
10.32614/CRAN.package.TreeDist
Citation
https://cran.r-project.org/web/packages/TreeDist/citation.html
CRAN checks
https://cran.r-project.org/web/checks/check_results_TreeDist.html
NEWS
https://cran.r-project.org/web/packages/TreeDist/news/news.html
Reference HTML
https://cran.r-project.org/web/packages/TreeDist/refman/TreeDist.html
Reference PDF
https://cran.r-project.org/web/packages/TreeDist/TreeDist.pdf
Source package
https://cran.r-project.org/src/contrib/TreeDist_2.14.0.tar.gz
Archive
https://CRAN.R-project.org/src/contrib/Archive/TreeDist
In views
OptimizationPhylogenetics
Page fields
Additional Repositories
https://ms609.github.io/packages/
Author
Martin R. Smith [aut, cre, cph, prg], Roy Jonker [prg, cph] (LAP algorithm), Yong Yang [ctb, cph] (LAP algorithm), Yi Cao [ctb, cph] (LAP algorithm), Neil Kaye [cph] (Mercator image)
BugReports
https://github.com/ms609/TreeDist/issues/
CRAN Checks
TreeDist results
Citation
TreeDist citation info
Copyright
Jonker-Volgenant Linear Assignment Problem implementation by Roy Jonker modified by Yong Yang and Yi Cao.
DOI
10.32614/CRAN.package.TreeDist
In Views
Optimization , Phylogenetics
Language
en-GB
License
GPL (≥ 3)
LinkingTo
Rcpp , TreeTools (≥ 2.1.0)
Maintainer
Martin R. Smith <martin.smith at durham.ac.uk>
Materials
NEWS
NeedsCompilation
yes
Old Sources
TreeDist archive
Package Source
TreeDist_2.14.0.tar.gz
Published
2026-05-09
Reference Manual
TreeDist.html , TreeDist.pdf
Reverse Imports
Rogue , rwty , TBRDist , Ternary , TreeSearch
Reverse Suggests
TreeTools
SystemRequirements
C++17, pandoc-citeproc
URL
https://ms609.github.io/TreeDist/ , https://github.com/ms609/TreeDist/
Version
2.14.0
Vignettes
Generalized Robinson-Foulds distances ( source , R code ) Extending the Robinson-Foulds metric ( source , R code ) Calculate tree similarity with 'TreeDist' ( source , R code ) Comparing sets of trees from different analyses ( source , R code ) Trees with different leaves ( source , R code ) Comparing splits using information theory ( source , R code ) Analysing landscapes of phylogenetic trees ( source , R code ) Tree space analysis ( source , R code ) Contextualizing tree distances ( source , R code )
Windows Binaries
r-devel: TreeDist_2.14.0.zip , r-release: TreeDist_2.14.0.zip , r-oldrel: TreeDist_2.14.0.zip
MacOS Binaries
r-release (arm64): TreeDist_2.14.0.tgz , r-oldrel (arm64): TreeDist_2.14.0.tgz , r-release (x86_64): TreeDist_2.14.0.tgz , r-oldrel (x86_64): TreeDist_2.14.0.tgz
Version
2.14.0
LinkingTo
Rcpp , TreeTools (≥ 2.1.0)
RcppTreeTools
Published
2026-05-09
DOI
10.32614/CRAN.package.TreeDist
10.32614/CRAN.package.TreeDist
Author
Martin R. Smith [aut, cre, cph, prg], Roy Jonker [prg, cph] (LAP algorithm), Yong Yang [ctb, cph] (LAP algorithm), Yi Cao [ctb, cph] (LAP algorithm), Neil Kaye [cph] (Mercator image)
https://orcid.org/0000-0001-5660-1727
Maintainer
Martin R. Smith <martin.smith at durham.ac.uk>
BugReports
https://github.com/ms609/TreeDist/issues/
https://github.com/ms609/TreeDist/issues/
License
GPL (≥ 3)
GPL (≥ 3)
Copyright
Jonker-Volgenant Linear Assignment Problem implementation by Roy Jonker modified by Yong Yang and Yi Cao.
URL
https://ms609.github.io/TreeDist/ , https://github.com/ms609/TreeDist/
https://ms609.github.io/TreeDist/https://github.com/ms609/TreeDist/
NeedsCompilation
yes
SystemRequirements
C++17, pandoc-citeproc
Additional Repositories
https://ms609.github.io/packages/
https://ms609.github.io/packages/
Language
en-GB
Citation
TreeDist citation info
TreeDist citation info
Materials
NEWS
NEWS
In Views
Optimization , Phylogenetics
OptimizationPhylogenetics
CRAN Checks
TreeDist results
TreeDist results
Reference Manual
TreeDist.html , TreeDist.pdf
TreeDist.htmlTreeDist.pdf
Vignettes
Generalized Robinson-Foulds distances ( source , R code ) Extending the Robinson-Foulds metric ( source , R code ) Calculate tree similarity with 'TreeDist' ( source , R code ) Comparing sets of trees from different analyses ( source , R code ) Trees with different leaves ( source , R code ) Comparing splits using information theory ( source , R code ) Analysing landscapes of phylogenetic trees ( source , R code ) Tree space analysis ( source , R code ) Contextualizing tree distances ( source , R code )
Generalized Robinson-Foulds distancessourceR codeExtending the Robinson-Foulds metricsourceR codeCalculate tree similarity with 'TreeDist'sourceR codeComparing sets of trees from different analysessourceR codeTrees with different leavessourceR codeComparing splits using information theorysourceR codeAnalysing landscapes of phylogenetic treessource
Package Source
TreeDist_2.14.0.tar.gz
TreeDist_2.14.0.tar.gz
Windows Binaries
r-devel: TreeDist_2.14.0.zip , r-release: TreeDist_2.14.0.zip , r-oldrel: TreeDist_2.14.0.zip
TreeDist_2.14.0.zipTreeDist_2.14.0.zipTreeDist_2.14.0.zip
MacOS Binaries
r-release (arm64): TreeDist_2.14.0.tgz , r-oldrel (arm64): TreeDist_2.14.0.tgz , r-release (x86_64): TreeDist_2.14.0.tgz , r-oldrel (x86_64): TreeDist_2.14.0.tgz
TreeDist_2.14.0.tgzTreeDist_2.14.0.tgzTreeDist_2.14.0.tgzTreeDist_2.14.0.tgz
Old Sources
TreeDist archive
TreeDist archive
Reverse Imports
Rogue , rwty , TBRDist , Ternary , TreeSearch
RoguerwtyTBRDistTernaryTreeSearch
Reverse Suggests
TreeTools
TreeTools
Page sections 4
Documentation
Heading
Documentation
Links
[{"label":"TreeDist.html","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/refman/TreeDist.html"},{"label":"TreeDist.pdf","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/TreeDist.pdf"},{"label":"Generalized Robinson-Foulds distances","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/Generalized-RF.html"},{"label":"source","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/Generalized-RF.Rmd"},{"label":"R code","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/Generalized-RF.R"},{"label":"Extending the Robinson-Foulds metric","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/Robinson-Foulds.html"},{"label":"source","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/Robinson-Foulds.Rmd"},{"label":"R code","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/Robinson-Foulds.R"},{"label":"Calculate tree similarity with 'TreeDist'","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/Using-TreeDist.html"},{"label":"source","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/Using-TreeDist.Rmd"},{"label":"R code","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/Using-TreeDist.R"},{"label":"Comparing sets of trees from different analyses","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/compare-treesets.html"},{"label":"source","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/compare-treesets.Rmd"},{"label":"R code","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/compare-treesets.R"},{"label":"Trees with different leaves","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/different-leaves.html"},{"label":"source","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/different-leaves.Rmd"},{"label":"R code","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/different-leaves.R"},{"label":"Comparing splits using information theory","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/information.html"},{"label":"source","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/information.Rmd"},{"label":"R code","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeDist/vignettes/information.R"}]
Text
Reference manual: TreeDist.html , TreeDist.pdf Vignettes: Generalized Robinson-Foulds distances ( source , R code ) Extending the Robinson-Foulds metric ( source , R code ) Calculate tree similarity with 'TreeDist' ( source , R code ) Comparing sets of trees from different analyses ( source , R code ) Trees with different leaves ( source , R code ) Comparing splits using information theory ( source , R code ) Analysing landscapes of phylogenetic trees ( source , R code ) Tree space analysis ( source , R code ) Contextualizing tree distances ( source , R code )
Downloads
Heading
Downloads
Links
[{"label":"TreeDist_2.14.0.tar.gz","section":"","type":"","url":"https://cran.r-project.org/src/contrib/TreeDist_2.14.0.tar.gz"},{"label":"TreeDist_2.14.0.zip","section":"","type":"","url":"https://cran.r-project.org/bin/windows/contrib/4.7/TreeDist_2.14.0.zip"},{"label":"TreeDist_2.14.0.zip","section":"","type":"","url":"https://cran.r-project.org/bin/windows/contrib/4.6/TreeDist_2.14.0.zip"},{"label":"TreeDist_2.14.0.zip","section":"","type":"","url":"https://cran.r-project.org/bin/windows/contrib/4.5/TreeDist_2.14.0.zip"},{"label":"TreeDist_2.14.0.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/sonoma-arm64/contrib/4.6/TreeDist_2.14.0.tgz"},{"label":"TreeDist_2.14.0.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/big-sur-arm64/contrib/4.5/TreeDist_2.14.0.tgz"},{"label":"TreeDist_2.14.0.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.6/TreeDist_2.14.0.tgz"},{"label":"TreeDist_2.14.0.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.5/TreeDist_2.14.0.tgz"},{"label":"TreeDist archive","section":"","type":"","url":"https://CRAN.R-project.org/src/contrib/Archive/TreeDist"}]
Text
Package source: TreeDist_2.14.0.tar.gz Windows binaries: r-devel: TreeDist_2.14.0.zip , r-release: TreeDist_2.14.0.zip , r-oldrel: TreeDist_2.14.0.zip macOS binaries: r-release (arm64): TreeDist_2.14.0.tgz , r-oldrel (arm64): TreeDist_2.14.0.tgz , r-release (x86_64): TreeDist_2.14.0.tgz , r-oldrel (x86_64): TreeDist_2.14.0.tgz Old sources: TreeDist archive
Reverse dependencies
Heading
Reverse dependencies
Links
[{"label":"Rogue","section":"","type":"","url":"https://cran.r-project.org/web/packages/Rogue/index.html"},{"label":"rwty","section":"","type":"","url":"https://cran.r-project.org/web/packages/rwty/index.html"},{"label":"TBRDist","section":"","type":"","url":"https://cran.r-project.org/web/packages/TBRDist/index.html"},{"label":"Ternary","section":"","type":"","url":"https://cran.r-project.org/web/packages/Ternary/index.html"},{"label":"TreeSearch","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeSearch/index.html"},{"label":"TreeTools","section":"","type":"","url":"https://cran.r-project.org/web/packages/TreeTools/index.html"}]
Text
Reverse imports: Rogue , rwty , TBRDist , Ternary , TreeSearch Reverse suggests: TreeTools
Linking
Heading
Linking
Links
[{"label":"https://CRAN.R-project.org/package=TreeDist","section":"","type":"","url":"https://CRAN.R-project.org/package=TreeDist"}]
Text
Please use the canonical form https://CRAN.R-project.org/package=TreeDist to link to this page.
Materials 1
NEWS
Documentation 29
TreeDist.htmlTreeDist.pdfGeneralized Robinson-Foulds distancessourceR codeExtending the Robinson-Foulds metricsourceR codeCalculate tree similarity with 'TreeDist'sourceR codeComparing sets of trees from different analysessourceR codeTrees with different leavessourceR codeComparing splits using information theorysourceR codeAnalysing landscapes of phylogenetic treessourceR codeTree space analysissourceR codeContextualizing tree distancessourceR code
Vignettes 27
Generalized Robinson-Foulds distancessourceR codeExtending the Robinson-Foulds metricsourceR codeCalculate tree similarity with 'TreeDist'sourceR codeComparing sets of trees from different analysessourceR codeTrees with different leavessourceR codeComparing splits using information theorysourceR codeAnalysing landscapes of phylogenetic treessourceR codeTree space analysissourceR codeContextualizing tree distancessourceR code
Downloads 9
TreeDist_2.14.0.tar.gzTreeDist_2.14.0.zipTreeDist_2.14.0.zipTreeDist_2.14.0.zipTreeDist_2.14.0.tgzTreeDist_2.14.0.tgzTreeDist_2.14.0.tgzTreeDist_2.14.0.tgzTreeDist archive
All page links 82
statsapeclicolorspaceRdpackshinyshinyjsTreeToolsRcppbookdownclusterggplot2hypervolumekdensityknitrMASSparallelphangornplotlyPlotToolsprotoclustQuartetreadxlrmarkdownrglRoguespellingTBRDist10.32614/CRAN.package.TreeDisthttps://orcid.org/0000-0001-5660-1727https://github.com/ms609/TreeDist/issues/GPL (≥ 3)https://ms609.github.io/TreeDist/https://github.com/ms609/TreeDist/https://ms609.github.io/packages/TreeDist citation infoNEWSOptimizationPhylogeneticsTreeDist resultsTreeDist.htmlTreeDist.pdfGeneralized Robinson-Foulds distancessourceR codeExtending the Robinson-Foulds metricsourceR codeCalculate tree similarity with 'TreeDist'sourceR codeComparing sets of trees from different analysessourceR codeTrees with different leavessourceR codeComparing splits using information theorysourceR codeAnalysing landscapes of phylogenetic treessourceTreeDist_2.14.0.tar.gzTreeDist_2.14.0.zipTreeDist_2.14.0.zipTreeDist_2.14.0.zipTreeDist_2.14.0.tgzTreeDist_2.14.0.tgzTreeDist_2.14.0.tgzTreeDist_2.14.0.tgzTreeDist archiverwtyTernaryTreeSearchR codeTree space analysissourceR codeContextualizing tree distancessourceR codehttps://CRAN.R-project.org/package=TreeDist

버전 이력

RepositoryVersionPublishedFirst seenLast seenDocs
CRAN2.14.02026-05-282026-05-30
CRAN2.12.02026-05-092026-05-09

보안

표시할 OSV 데이터가 없습니다.

문헌 신호

표시할 OpenAlex 데이터가 없습니다.

CRAN Task Views

Optimization and Mathematical Programming · 2026-05-30Phylogenetics · 2026-05-30